Research Study: Healthy Mitochondria could stop Alzheimer’s

Abstract

INTRODUCTION

Over 40 years ago, electron microscopy (EM) pictures of Alzheimer’s disease (AD) brains revealed altered mitochondrial infrastructures [1, 2]. Initial reports, though, offered limited speculation into the cause or significance of this basic observation. Later studies confirmed and extended the finding [3, 4]. In the early 1980 s, fluorodeoxyglucose positron emission tomography (FDG PET) studies showed brains from AD patients utilized less glucose than brains from control subjects [5–8], which piqued interest in a potential metabolism component for this disease [9–12]. Investigators subsequently attempted to explain reduced AD brain glucose utilization. Proposed hypotheses included impaired blood-brain barrier glucose transport [13], reduced tissue energy requirements due to reduced synaptic activity, a tissue-loss artifact, and lesions of energy metabolism enzymes [10].

Whether related or not to reduced FDG PET glucose utilization, around this time and shortly thereafter, studies in fact did reveal activity deficiencies in several bioenergetic flux-related enzymes. Some studies noted reductions in glycolysis enzymes [14]. Initially implicated mitochondria-localized enzymes included pyruvate dehydrogenase complex (PDHC) and α-ketoglutarate dehydrogenase complex (KGDHC) [15, 16]. Functional differences from control subjects were later demonstrated in additional Krebs cycle enzymes [17].

A single study from 1987 analyzed oxygen consumption in brain biopsy homogenates from dementia subjects [18]. Interestingly, under sub-maximal conditions oxygen consumption from the dementia patient homogenates exceeded that of the control subject homogenates. Mitochondrial uncoupling in the dementia subject homogenates potentially contributed to this perhaps unexpected finding. In contrast, PET, when used to quantify brain oxygen consumption in vivo, showed decreased oxygen consumption by AD brains [19, 20]. Consistent with the oxygen consumption PET data, Parker et al. in 1990 reported reductions in AD subject cytochrome oxidase (COX) activity [21].

Still, the origin and consequences of these seminal but descriptive observations remained unclear. An obvious consideration was whether mitochondrial or other bioenergetic lesions contributed to AD, or whether they simply represented a byproduct of the disease. Based on assumptions made by the amyloid cascade hypothesis, first proposed in the early 1990 s [22, 23], the latter possibility seemed more likely. Even when viewed from this perspective, though, accumulating data from the past two decades suggest if indeed mitochondrial-bioenergetic dysfunction represents a byproduct of more fundamental AD events, this dysfunction may yet play an important and possibly relatively upstream role in mediating AD dysfunction and degeneration. Other data, though, also argue mitochondrial dysfunction could represent an independent or perhaps even primary event in AD.

EVIDENCE OF SECONDARY MITOCHONDRIAL CASCADES IN AD

Sequential cleavages of the amyloid-β protein precursor (AβPP) produce a peptide byproduct called Aβ. A popular line of AD research argues Aβ, and perhaps specifically oligomeric conformations of a 42 amino acid-long Aβ species, initiates neurodegeneration [24, 25]. Cultured cells maintained in the presence of Aβ show reduced electron transport chain enzyme activities [26]. Aβ also impairs respiratory chain function in isolated mitochondria [27–29]. While such data indicate potential important relationships between Aβ and mitochondria might exist, they do not compellingly address the AD-relevance of an Aβ-induced mitochondrial lesion, let alone the presence of a resulting mitochondrialcascade.

A report from Cardoso et al. more directly assessed this question [30]. The authors added Aβ to the medium of human neuronal NT2 cells, which induced cell death. They similarly added Aβ to the medium of NT2 ρ0 cells, NT2 cells previously depleted of their mitochondrial DNA (mtDNA). Because they lack mtDNA, ρ0 cells do not produce key respiratory chain subunits and are respiration-incompetent. The Aβ treatment did not harm the ρ0 cells. These studies suggested mitochondria in general, and the respiratory chain specifically, may mediate Aβ toxicity. This study was perhaps the first to make a case for a possible Aβ-induced mitochondrial cascadein AD.

Subsequently, studies revealed AβPP and Aβ co-localize with mitochondria [31–37]. Prominent early observations came from models that featured an artificial expression of AβPP, and of Aβ overproduction. Because artificial expression or overproduction of a protein may affect its intracellular targeting, it is reasonable to question the physiologic relevance of these findings. However, analyses show mitochondria from AD subject autopsy brains do appear to contain Aβ [33, 35, 38, 39].

Research by Yan and colleagues sought to define how Aβ located within mitochondria might mediate mitochondrial dysfunction and result in a downstream pathologic cascade. In the first of these studies, that of Lustbader et al., Aβ bound a dehydrogenase protein the authors called the Aβ-binding alcohol dehydrogenase (ABAD) [31]. Blocking ABAD-Aβ physical interactions mitigated oxidative stress and apoptosis. In the second study, that of Du et al., Aβ bound cyclophilin D (cypD), a component of the mitochondrial transition pore. CypD knock-out reduced oxidative stress and apoptosis, and cypD knock-out preserved cognitive performance in AβPP transgenic mice [36]. The results of these studies are consistent with the possible presence of functionally important Aβ-induced, mitochondria-mediated pathologic cascades in AD.

AβPP itself contains a reported mitochondrial targeting motif [40–44]. When AβPP accesses mitochondria, it partly passes through the mitochondrial protein import apparatus, including the translocase of the outer mitochondrial membrane 40 kilodalton (TOMM40) protein pore. This passage ultimately does not complete, due to the presence of an AβPP acidic domain, and the mitochondrial import-arrested AβPP both clogs the import infrastructure and protrudes from the mitochondria and into the cytoplasm. The presence of arrested AβPP in the mitochondria (with its associated C-terminal end extended into the cytosol) reportedly reduces COX activity [40].

Altered calcium homeostasis represents yet another fundamental physiologic alteration Aβ can induce [45, 46]. In both cell and animal experimental models, Aβ appears to both enhance the ability of calcium to access the cytoplasm, and reduce the cell’s ability to lower its cytosolic calcium levels. Elevated calcium interferes with mitochondrial function, which reduces ATP production. An inhibition of oxidative phosphorylation additionally depolarizes mitochondria, which further impairs the ability of cells to buffer calcium loads. Based on this, some propose an AD “calcium hypothesis [47].” Under this scenario, Aβ-induced changes in calcium homeostasis adversely impact mitochondrial function, and through this drive other AD-associated changes in brain function. Disrupted calcium handling, therefore, could represent a mechanism via which secondary mitochondrial cascades initiated by Aβ ultimately drive this disease.

Other studies performed using transgenic mice designed to model human AD infer a meaningful role for mitochondrial damage (at least in these models). For example, Reddy et al. found that in mice expressing a mutant human AβPP transgene, an apparent compensatory upregulation of respiratory chain enzyme subunits preceded both behavioral change and Aβ plaque deposition [48].

Recent reports indicate either AβPP overexpression or Aβ exposure affects various aspects of mitochondrial function [43]. In both AβPP transgenic mice and cultured cells treated with Aβ, the balance between mitochondrial fission and fusion shifts in favor of fission [49–52]. Fewer mitochondria also distribute throughout dendrites. Analyses of brains from AD patients show similar changes [3]. If Aβ causes these mitochondrial perturbations in autopsy brains, and these mitochondrial perturbations in turn contribute to neuron dysfunction or degeneration, they could represent evidence of an Aβ-induced, mitochondria-mediated cascade [43, 53]. Figure 1 illustrates potential causes and consequences of a secondary mitochondrial cascade.

EVIDENCE OF A PRIMARY MITOCHONDRIAL CASCADE IN AD

Interestingly, some of the more influential discoveries of altered energy metabolism enzymes arose from studies of non-brain tissues, and were latersubsequently documented in brain parenchyma. Parker and colleagues first documented lower AD COX activity in platelets [21]. Blass, Gibson, and colleagues first showed reduced KGDHC activity in fibroblasts, and lowered transketolase activity in red blood cells [16]. Reports from the mid-1980 s noted altered patterns of glucose and oxygen consumption in fibroblasts from AD subjects [54, 55].

While biochemical defects in AD brain could represent a consequence of neurodegeneration, neurodegeneration per se should not directly cause specific biochemical defects outside the neuro-axis and in non-degenerating tissues. Other structural brain changes that could affect energy metabolism, such as synaptic loss, similarly should not directly cause non-neural biochemical defects. AβPP or Aβ could perhaps drive biochemical changes in different tissues provided their expression and production occurs in those tissues. To this point, AβPP does appear outside of the brain, but expresses as different isoforms. Aβ also exists in multiple tissues outside of the brain, including blood vessels, skin, subcutaneous tissues, intestine, and muscle [56]. To what extent peripheral processing of AβPP to Aβ occurs locally, or whether Aβ simply exports to these tissues, remains unknown although it increasingly appears that some tissues do locally generate Aβ. Two examples include muscle and platelets [57–59].

The presence of distinct, definable biochemical features outside the brains of AD subjects and within multiple tissues suggests at a biochemical level, AD is not a brain-limited process or event. At the very least, it is hard to see how a single, stochastic Aβ oligomerization-aggregation event occurring within the brain could alter either AβPP homeostasis or energy metabolism across multiple tissues. Even if altered Aβ homeostasis does contribute to non-brain bioenergetic or mitochondrial features seen in AD subjects, the question of why Aβ homeostasis itself changes across multiple tissues warrants consideration.

An alternative possibility is that altered energy metabolism in AD subjects exists independently of AβPP or Aβ, and that altered energy metabolism drives changes in AβPP and Aβ homeostasis. Existing data support this possibility. In cell culture experiments, Gabuzda et al. found COX inhibition shifts AβPP processing toward the amyloidogenic pathway that ultimately produces Aβ [60]. Mitochondria-generated reactive oxygen species may play a particularly important role in shifting AβPP processing to Aβ [61]. Other cell culture studies suggest interfering with cell bioenergetics shifts AβPP processing away from its non-amyloidogenic pathway, and presumably towards the amyloidogenic pathway [62, 63].

One study found transgenic mice that concurrently expressed a mutant human AβPP gene and proof reading-defective mtDNA polymerase γ (mtPOLG) showed enhanced Aβ plaque deposition [64]. Due to the presence of the mutated mtPOLG transgene, these mice acquire excess somatic mtDNA mutations and mitochondrial dysfunction [65, 66]. This finding links mitochondrial dysfunction to plaque deposition. Other studies performed using AD mouse models report similar links, although the direction of the relationship differed. Moraes and colleagues previously reported, in two studies using different approaches, that interfering with respiratory chain assembly actually reduces Aβ plaque deposition[67, 68]. In one case, the authors induced mitochondrial dysfunction through targeted knockout of the gene for COX10, which encodes a farnesyltransferase required for COX assembly. In the other, they expressed a mitochondria-targeted restriction enzyme that cleaves mtDNA. It is unclear why driving mitochondrial dysfunction through different approaches produced either increased or decreased plaque deposition. Most likely, methodologic factors are relevant. In the Moraes group studies, the mice produced less respiratory chain infrastructure, and with mtPOLG driving mitochondrial dysfunction aberrant rather than less respiratory chain infrastructure likely resulted. Other potential factors could include differential effects on cell unfolded protein responses. Regardless, studies such as these link mitochondria to plaque deposition.

In another study, Scheffler et al. used a selective breeding strategy to create AβPP transgenic mice that varied primarily in the origin of their mitochondria [69]. More specifically, the authors created mice that contained mitochondria from different mouse strains. Ultimately, the various groups of mice differed only in their mtDNA sequences. This study reflected two previous studies performed in cytoplasmic hybrid (cybrid) cell lines, in which the investigators generated human cell lines containing mtDNA from different individuals [70, 71]. Both studies created a group of cybrid lines in which the mtDNA came from individuals with AD, and a group of cybrid lines in which the mtDNA came from age-matched, control subjects. In each case, the cybrid lines that contained the mtDNA form the AD subjects produced (or at least retained) more Aβ.

The use of cybrid cell lines that contain mtDNA from AD subjects, herein referred to as “AD cybrids,” warrants additional consideration. Cybrid studies in general are consistent with the presence of a primary mitochondrial cascade in AD. AD cybrid cell lines were first created in the 1990 s to address the specific question of whether mtDNA contributes to lower platelet COX activity in AD subjects [72, 73]. First, the investigators removed the endogenous mtDNA from human neuronal cell lines, either the SH-SY5Y neuroblastoma cell line or the NT2 teratocarcinoma cell line, thereby creating SH-SY5Y and NT2 ρ0 cell lines [73–75]. Next, they isolated platelets from blood samples taken from subjects with and without AD. Briefly maintaining platelets from individual subjects with ρ0 cells in the presence of a detergent allows for the mixing of platelet and ρ0 cell cytoplasms. Selecting specifically for cells that contain a ρ0 cell nucleus and platelet mitochondria results in the isolation of a unique cybrid line. Because the nuclear component of cybrid cell lines prepared using a particular ρ0 cell line is similar if not identical, different cybrid cell lines generally contain the same nuclear DNA [76]. As for components transferred from platelets, the only component that can perpetuate over time is the mtDNA that is contained within the platelet mitochondria. As the cells divide, all other platelet-derived components degrade and dilute. Ultimately, the most fundamental difference between different cybrid cell lines prepared on the same nuclear background is their mtDNA sequence. The transfer of platelet mitochondria, and the mtDNA they contain, to ρ0 cells to create cybrid cells restores the ability of the former ρ0 cells to respire. In this case, the respiratory chains of the cybrid cells jointly consists of subunits encoded from the nuclear DNA of the original cell line nucleus and the mtDNA from the particular platelet donor [76]. Between cybrid cell lines prepared on the same nuclear background, the nuclear DNA-encoded respiratory chain subunits are presumably identical. The mtDNA-encoded respiratory chain subunits, though, differ because mtDNA sequences vary between individuals. Differences between mtDNA sequences affect respiratory chain function, so that cybrid cell lines containing mtDNA from different donors vary in terms of respiratory function. This in turn leads to differences in mitochondrial function, which mediates effects on a variety of cell characteristics.

Studies generally report that although COX activities between individual cybrid cell lines prepared from AD or control subject platelets do overlap, mean COX activity in groups of AD cybrids is lower than that of the comparative control groups [72, 73, 77–79]. In these experiments, a transfer of AβPP or Aβ is much less likely to drive the observed lower mean COX activity. Rather, cybrid data indicate mtDNA at least partly accounts for the observed reduction in AD subject platelet mitochondria COX activity. The magnitude of the difference between COX activity means varies between studies, but generally reflects a 15–40% activity reduction [80]. Methodologic differences likely contribute to this range.

Importantly, differences between AD and control cybrid lines are not limited to COX activity. While values among AD and control lines generally overlap for measured parameters, mean values for a given group of AD cybrid lines occasionally are higher or lower than their comparative control group cybrid lines [70–73, 77–79, 81–97]. Increased parameters include markers of oxidative stress, Aβ production, stress pathway activation, NFκB activation, apoptotic signaling, and mitochondrial fission. Decreased parameters include mitochondrial membrane potential, ATP levels, oxygen consumption, glycolysis flux, calcium homeostasis, and peroxisome proliferator-activated receptor γ related complex α (PGC1α). These differences tend to recapitulate features observed in studies of brains from AD subjects. Because the only consistent difference between cybrid lines of AD and control groups is whether the mtDNA they contain originated from AD versus control subjects, and the mtDNA within the cybrid lines derived from a non-brain, non-degenerating tissue, and it is not clear how transferred AβPP or Aβ could account for the observed biochemical and molecular changes, cybrid data support the presence of a primary mitochondrial cascade in AD (Fig. 2).